Using RMarkdown


  • Use .md files for episodes when you want static content
  • Use .Rmd files for episodes when you need to generate output
  • Run sandpaper::check_lesson() to identify any issues with your lesson
  • Run sandpaper::build_lesson() to preview your lesson locally

Objectives


Why is a good experimental design vital?


Terminology


The importance of replicates to estimate variance


How many replicates and how many reads do I need?


Sequencing options to consider


Summary